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Cluster: Rep_1341_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1341_c_85 Rep_1341_c_85_1 134 3043 + GT51
TC Rep_1341_c_85 Rep_1341_c_85_2 3082 3438 - 9.A.11.1.1
TC Rep_1341_c_85 Rep_1341_c_85_3 3452 4471 - 9.A.11.1.1
TC Rep_1341_c_85 Rep_1341_c_85_4 4473 4922 - 9.A.11.1.1
TC Rep_1341_c_85 Rep_1341_c_85_5 4936 5355 - 9.A.11.1.1
TC Rep_1341_c_85 Rep_1341_c_85_6 5367 6002 - 9.A.11.1.1
Gene ID: Rep_1341_c_85_1
Type: CAZyme
Location: 134 - 3043 (+)
Gene ID: Rep_1341_c_85_2
Type: TC
Location: 3082 - 3438 (-)
Gene ID: Rep_1341_c_85_3
Type: TC
Location: 3452 - 4471 (-)
Gene ID: Rep_1341_c_85_4
Type: TC
Location: 4473 - 4922 (-)
Gene ID: Rep_1341_c_85_5
Type: TC
Location: 4936 - 5355 (-)
Gene ID: Rep_1341_c_85_6
Type: TC
Location: 5367 - 6002 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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