Cluster: Rep_1341_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1341
- CGC Family ID: CGCFAM_00620
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1341_c_18 | Rep_1341_c_18_3 | 2079 | 3878 | + | 3.A.1.106.2 |
| TC | Rep_1341_c_18 | Rep_1341_c_18_4 | 3895 | 5712 | + | 3.A.1.135.5 |
| TC | Rep_1341_c_18 | Rep_1341_c_18_5 | 5830 | 7419 | - | 2.A.21.3.21 |
| CAZyme | Rep_1341_c_18 | Rep_1341_c_18_6 | 7601 | 8623 | - | GH177 |
| pfam | Rep_1341_c_18 | Rep_1341_c_18_7 | 8650 | 9546 | - | AP_endonuc_2 |
| CAZyme | Rep_1341_c_18 | Rep_1341_c_18_8 | 9582 | 10595 | - | GH177 |
Gene ID: Rep_1341_c_18_3
Type: TC
Location: 2079 - 3878 (+)
Type: TC
Location: 2079 - 3878 (+)
Gene ID: Rep_1341_c_18_4
Type: TC
Location: 3895 - 5712 (+)
Type: TC
Location: 3895 - 5712 (+)
Gene ID: Rep_1341_c_18_5
Type: TC
Location: 5830 - 7419 (-)
Type: TC
Location: 5830 - 7419 (-)
Gene ID: Rep_1341_c_18_6
Type: CAZyme
Location: 7601 - 8623 (-)
Type: CAZyme
Location: 7601 - 8623 (-)
Gene ID: Rep_1341_c_18_7
Type: pfam
Location: 8650 - 9546 (-)
Type: pfam
Location: 8650 - 9546 (-)
Gene ID: Rep_1341_c_18_8
Type: CAZyme
Location: 9582 - 10595 (-)
Type: CAZyme
Location: 9582 - 10595 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sporanaerobacteraceae
Genus
Anaerosalibacter
Species
Anaerosalibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.