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Cluster: Rep_1341_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1341_c_7 Rep_1341_c_7_8 8177 10555 - GT35
CAZyme Rep_1341_c_7 Rep_1341_c_7_9 10561 12039 - GH77
CAZyme Rep_1341_c_7 Rep_1341_c_7_10 12052 14205 - GH31_1
TC Rep_1341_c_7 Rep_1341_c_7_11 14221 15048 - 3.A.1.1.45
TC Rep_1341_c_7 Rep_1341_c_7_12 15048 15914 - 3.A.1.1.45
TC Rep_1341_c_7 Rep_1341_c_7_13 15981 17339 - 3.A.1.1.45
TC Rep_1341_c_7 Rep_1341_c_7_14 17351 18463 - 3.A.1.1.6
TF Rep_1341_c_7 Rep_1341_c_7_15 18476 19495 - LacI
peptidase Rep_1341_c_7 Rep_1341_c_7_16 19655 21289 - M20.UPW
TC Rep_1341_c_7 Rep_1341_c_7_17 21346 22722 - 2.A.25.1.3
Gene ID: Rep_1341_c_7_8
Type: CAZyme
Location: 8177 - 10555 (-)
Gene ID: Rep_1341_c_7_9
Type: CAZyme
Location: 10561 - 12039 (-)
Gene ID: Rep_1341_c_7_10
Type: CAZyme
Location: 12052 - 14205 (-)
Gene ID: Rep_1341_c_7_11
Type: TC
Location: 14221 - 15048 (-)
Gene ID: Rep_1341_c_7_12
Type: TC
Location: 15048 - 15914 (-)
Gene ID: Rep_1341_c_7_13
Type: TC
Location: 15981 - 17339 (-)
Gene ID: Rep_1341_c_7_14
Type: TC
Location: 17351 - 18463 (-)
Gene ID: Rep_1341_c_7_15
Type: TF
Location: 18476 - 19495 (-)
Gene ID: Rep_1341_c_7_16
Type: peptidase
Location: 19655 - 21289 (-)
Gene ID: Rep_1341_c_7_17
Type: TC
Location: 21346 - 22722 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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