Cluster: Rep_1340_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1340
- CGC Family ID: CGCFAM_00209
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1340_c_96 | Rep_1340_c_96_1 | 339 | 1421 | + | GH170 |
| STP | Rep_1340_c_96 | Rep_1340_c_96_2 | 1408 | 2298 | + | SIS |
| TC | Rep_1340_c_96 | Rep_1340_c_96_3 | 2348 | 3811 | + | 4.A.1.2.7 |
| TF | Rep_1340_c_96 | Rep_1340_c_96_4 | 3825 | 4679 | + | HTH_6 |
| TC | Rep_1340_c_96 | Rep_1340_c_96_5 | 4737 | 5324 | + | 4.A.1.1.9 |
Gene ID: Rep_1340_c_96_1
Type: CAZyme
Location: 339 - 1421 (+)
Type: CAZyme
Location: 339 - 1421 (+)
Gene ID: Rep_1340_c_96_2
Type: STP
Location: 1408 - 2298 (+)
Type: STP
Location: 1408 - 2298 (+)
Gene ID: Rep_1340_c_96_3
Type: TC
Location: 2348 - 3811 (+)
Type: TC
Location: 2348 - 3811 (+)
Gene ID: Rep_1340_c_96_4
Type: TF
Location: 3825 - 4679 (+)
Type: TF
Location: 3825 - 4679 (+)
Gene ID: Rep_1340_c_96_5
Type: TC
Location: 4737 - 5324 (+)
Type: TC
Location: 4737 - 5324 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Garciellaceae
Genus
Garciella
Species
Garciella sp900555725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.