Cluster: Rep_1340_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1340
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1340_c_86 | Rep_1340_c_86_4 | 3721 | 4743 | + | GH177 |
| pfam | Rep_1340_c_86 | Rep_1340_c_86_5 | 4770 | 5663 | + | AP_endonuc_2 |
| TC | Rep_1340_c_86 | Rep_1340_c_86_6 | 5818 | 7479 | + | 2.A.21.3.21 |
Gene ID: Rep_1340_c_86_4
Type: CAZyme
Location: 3721 - 4743 (+)
Type: CAZyme
Location: 3721 - 4743 (+)
Gene ID: Rep_1340_c_86_5
Type: pfam
Location: 4770 - 5663 (+)
Type: pfam
Location: 4770 - 5663 (+)
Gene ID: Rep_1340_c_86_6
Type: TC
Location: 5818 - 7479 (+)
Type: TC
Location: 5818 - 7479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Garciellaceae
Genus
Garciella
Species
Garciella sp900555725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.