Cluster: Rep_1340_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1340
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1340_c_16 | Rep_1340_c_16_2 | 954 | 2084 | + | CE9 |
| pfam | Rep_1340_c_16 | Rep_1340_c_16_3 | 2129 | 2863 | + | Glucosamine_iso |
| pfam | Rep_1340_c_16 | Rep_1340_c_16_4 | 3454 | 4026 | + | VanZ |
| TC | Rep_1340_c_16 | Rep_1340_c_16_5 | 4293 | 5588 | + | 2.A.45.2.2 |
| peptidase | Rep_1340_c_16 | Rep_1340_c_16_6 | 5789 | 7396 | + | C26.964 |
| pfam | Rep_1340_c_16 | Rep_1340_c_16_7 | 7693 | 8829 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | Rep_1340_c_16 | Rep_1340_c_16_8 | 8993 | 10246 | + | 8.A.59.2.1 |
Gene ID: Rep_1340_c_16_2
Type: CAZyme
Location: 954 - 2084 (+)
Type: CAZyme
Location: 954 - 2084 (+)
Gene ID: Rep_1340_c_16_3
Type: pfam
Location: 2129 - 2863 (+)
Type: pfam
Location: 2129 - 2863 (+)
Gene ID: Rep_1340_c_16_4
Type: pfam
Location: 3454 - 4026 (+)
Type: pfam
Location: 3454 - 4026 (+)
Gene ID: Rep_1340_c_16_5
Type: TC
Location: 4293 - 5588 (+)
Type: TC
Location: 4293 - 5588 (+)
Gene ID: Rep_1340_c_16_6
Type: peptidase
Location: 5789 - 7396 (+)
Type: peptidase
Location: 5789 - 7396 (+)
Gene ID: Rep_1340_c_16_7
Type: pfam
Location: 7693 - 8829 (+)
Type: pfam
Location: 7693 - 8829 (+)
Gene ID: Rep_1340_c_16_8
Type: TC
Location: 8993 - 10246 (+)
Type: TC
Location: 8993 - 10246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Garciellaceae
Genus
Garciella
Species
Garciella sp900555725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.