Cluster: Rep_1340_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: Rep_1340
- CGC Family ID: CGCFAM_00012
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1340_c_202 | Rep_1340_c_202_1 | 2 | 910 | - | GH1 |
| TC | Rep_1340_c_202 | Rep_1340_c_202_2 | 932 | 1237 | - | 4.A.3.2.6 |
| TC | Rep_1340_c_202 | Rep_1340_c_202_3 | 1259 | 1585 | - | 4.A.3.2.2 |
| CAZyme | Rep_1340_c_202 | Rep_1340_c_202_4 | 1606 | 2706 | - | GH170 |
| TC | Rep_1340_c_202 | Rep_1340_c_202_5 | 2822 | 3610 | - | 4.A.3.2.2 |
Gene ID: Rep_1340_c_202_1
Type: CAZyme
Location: 2 - 910 (-)
Type: CAZyme
Location: 2 - 910 (-)
Gene ID: Rep_1340_c_202_2
Type: TC
Location: 932 - 1237 (-)
Type: TC
Location: 932 - 1237 (-)
Gene ID: Rep_1340_c_202_3
Type: TC
Location: 1259 - 1585 (-)
Type: TC
Location: 1259 - 1585 (-)
Gene ID: Rep_1340_c_202_4
Type: CAZyme
Location: 1606 - 2706 (-)
Type: CAZyme
Location: 1606 - 2706 (-)
Gene ID: Rep_1340_c_202_5
Type: TC
Location: 2822 - 3610 (-)
Type: TC
Location: 2822 - 3610 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Garciellaceae
Genus
Garciella
Species
Garciella sp900555725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.