Cluster: Rep_1340_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1340
- CGC Family ID: CGCFAM_00486
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1340_c_158 | Rep_1340_c_158_1 | 109 | 924 | - | 4.A.6.1.13 |
| TC | Rep_1340_c_158 | Rep_1340_c_158_2 | 911 | 1723 | - | 4.A.6.1.13 |
| NULL(UNKNOWN) | Rep_1340_c_158 | Rep_1340_c_158_3 | 1745 | 2320 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1340_c_158 | Rep_1340_c_158_4 | 2313 | 2720 | - | 4.A.6.1.18 |
| TC | Rep_1340_c_158 | Rep_1340_c_158_5 | 2743 | 3222 | - | 4.A.6.1.18 |
| CAZyme | Rep_1340_c_158 | Rep_1340_c_158_6 | 3226 | 5004 | - | GH35 |
Gene ID: Rep_1340_c_158_1
Type: TC
Location: 109 - 924 (-)
Type: TC
Location: 109 - 924 (-)
Gene ID: Rep_1340_c_158_2
Type: TC
Location: 911 - 1723 (-)
Type: TC
Location: 911 - 1723 (-)
Gene ID: Rep_1340_c_158_3
Type:
Location: 1745 - 2320 (-)
Type:
Location: 1745 - 2320 (-)
Gene ID: Rep_1340_c_158_4
Type: TC
Location: 2313 - 2720 (-)
Type: TC
Location: 2313 - 2720 (-)
Gene ID: Rep_1340_c_158_5
Type: TC
Location: 2743 - 3222 (-)
Type: TC
Location: 2743 - 3222 (-)
Gene ID: Rep_1340_c_158_6
Type: CAZyme
Location: 3226 - 5004 (-)
Type: CAZyme
Location: 3226 - 5004 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Eubacteriales
Family
Garciellaceae
Genus
Garciella
Species
Garciella sp900555725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.