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Cluster: Rep_1338_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1338_c_5 Rep_1338_c_5_66 47965 48708 + 9.B.102.1.12
pfam Rep_1338_c_5 Rep_1338_c_5_67 48859 49017 + Sulf_transp
pfam Rep_1338_c_5 Rep_1338_c_5_68 49279 51012 - NFACT-R_1 | NFACT_N
TC Rep_1338_c_5 Rep_1338_c_5_69 51030 51848 - 3.A.1.26.7
TC Rep_1338_c_5 Rep_1338_c_5_70 51848 52702 - 3.A.1.26.7
TC Rep_1338_c_5 Rep_1338_c_5_71 52702 53547 - 3.A.1.26.7
TF Rep_1338_c_5 Rep_1338_c_5_72 53740 55518 - 0037861
TC Rep_1338_c_5 Rep_1338_c_5_73 55635 57143 - 2.A.66.2.22
pfam Rep_1338_c_5 Rep_1338_c_5_74 57163 57975 - LicD
pfam Rep_1338_c_5 Rep_1338_c_5_75 57985 58794 - LicD
CAZyme Rep_1338_c_5 Rep_1338_c_5_76 58794 59771 - GT2
Gene ID: Rep_1338_c_5_66
Type: TC
Location: 47965 - 48708 (+)
Gene ID: Rep_1338_c_5_67
Type: pfam
Location: 48859 - 49017 (+)
Gene ID: Rep_1338_c_5_68
Type: pfam
Location: 49279 - 51012 (-)
Gene ID: Rep_1338_c_5_69
Type: TC
Location: 51030 - 51848 (-)
Gene ID: Rep_1338_c_5_70
Type: TC
Location: 51848 - 52702 (-)
Gene ID: Rep_1338_c_5_71
Type: TC
Location: 52702 - 53547 (-)
Gene ID: Rep_1338_c_5_72
Type: TF
Location: 53740 - 55518 (-)
Gene ID: Rep_1338_c_5_73
Type: TC
Location: 55635 - 57143 (-)
Gene ID: Rep_1338_c_5_74
Type: pfam
Location: 57163 - 57975 (-)
Gene ID: Rep_1338_c_5_75
Type: pfam
Location: 57985 - 58794 (-)
Gene ID: Rep_1338_c_5_76
Type: CAZyme
Location: 58794 - 59771 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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