Cluster: Rep_1338_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1338
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1338_c_3 | Rep_1338_c_3_132 | 143217 | 144188 | + | 9.B.146.1.6 |
| pfam | Rep_1338_c_3 | Rep_1338_c_3_133 | 144203 | 145528 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1338_c_3 | Rep_1338_c_3_134 | 145528 | 146631 | + | 2.A.103.1.3 |
| CAZyme | Rep_1338_c_3 | Rep_1338_c_3_135 | 146612 | 147742 | + | GT28 |
Gene ID: Rep_1338_c_3_132
Type: TC
Location: 143217 - 144188 (+)
Type: TC
Location: 143217 - 144188 (+)
Gene ID: Rep_1338_c_3_133
Type: pfam
Location: 144203 - 145528 (+)
Type: pfam
Location: 144203 - 145528 (+)
Gene ID: Rep_1338_c_3_134
Type: TC
Location: 145528 - 146631 (+)
Type: TC
Location: 145528 - 146631 (+)
Gene ID: Rep_1338_c_3_135
Type: CAZyme
Location: 146612 - 147742 (+)
Type: CAZyme
Location: 146612 - 147742 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Parvimonas
Species
Parvimonas micra
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.