Cluster: Rep_1338_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1338
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1338_c_1 | Rep_1338_c_1_21 | 25445 | 26941 | - | 2.A.15.1.1 |
| STP | Rep_1338_c_1 | Rep_1338_c_1_22 | 27366 | 28019 | + | TetR_N |
| NULL(UNKNOWN) | Rep_1338_c_1 | Rep_1338_c_1_23 | 28257 | 28643 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1338_c_1 | Rep_1338_c_1_24 | 28712 | 29797 | - | GT28 |
Gene ID: Rep_1338_c_1_21
Type: TC
Location: 25445 - 26941 (-)
Type: TC
Location: 25445 - 26941 (-)
Gene ID: Rep_1338_c_1_22
Type: STP
Location: 27366 - 28019 (+)
Type: STP
Location: 27366 - 28019 (+)
Gene ID: Rep_1338_c_1_23
Type:
Location: 28257 - 28643 (-)
Type:
Location: 28257 - 28643 (-)
Gene ID: Rep_1338_c_1_24
Type: CAZyme
Location: 28712 - 29797 (-)
Type: CAZyme
Location: 28712 - 29797 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Parvimonas
Species
Parvimonas micra
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.