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Cluster: Rep_1336_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1336_c_21 Rep_1336_c_21_2 647 1831 - CE4
pfam Rep_1336_c_21 Rep_1336_c_21_3 1892 3853 - DUF4901
TC Rep_1336_c_21 Rep_1336_c_21_4 3971 5560 + 3.A.1.121.4
TC Rep_1336_c_21 Rep_1336_c_21_5 5610 7046 - 2.A.38.1.1
STP Rep_1336_c_21 Rep_1336_c_21_6 7024 8412 - TrkA_C | TrkA_C
NULL(UNKNOWN) Rep_1336_c_21 Rep_1336_c_21_7 8571 9698 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1336_c_21 Rep_1336_c_21_8 9803 12190 - 8.A.7.1.4
STP Rep_1336_c_21 Rep_1336_c_21_9 12229 12753 - CYTH
pfam Rep_1336_c_21 Rep_1336_c_21_10 12787 13473 - Metallophos
TC Rep_1336_c_21 Rep_1336_c_21_11 13470 15755 - 1.C.105.2.8
Gene ID: Rep_1336_c_21_2
Type: CAZyme
Location: 647 - 1831 (-)
Gene ID: Rep_1336_c_21_3
Type: pfam
Location: 1892 - 3853 (-)
Gene ID: Rep_1336_c_21_4
Type: TC
Location: 3971 - 5560 (+)
Gene ID: Rep_1336_c_21_5
Type: TC
Location: 5610 - 7046 (-)
Gene ID: Rep_1336_c_21_6
Type: STP
Location: 7024 - 8412 (-)
Gene ID: Rep_1336_c_21_7
Type:
Location: 8571 - 9698 (-)
Gene ID: Rep_1336_c_21_8
Type: TC
Location: 9803 - 12190 (-)
Gene ID: Rep_1336_c_21_9
Type: STP
Location: 12229 - 12753 (-)
Gene ID: Rep_1336_c_21_10
Type: pfam
Location: 12787 - 13473 (-)
Gene ID: Rep_1336_c_21_11
Type: TC
Location: 13470 - 15755 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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