Cluster: Rep_1332_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1332
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1332_c_19 | Rep_1332_c_19_3 | 1939 | 3021 | - | GT28 |
| TC | Rep_1332_c_19 | Rep_1332_c_19_4 | 3018 | 4145 | - | 2.A.103.1.3 |
| pfam | Rep_1332_c_19 | Rep_1332_c_19_5 | 4146 | 5465 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1332_c_19 | Rep_1332_c_19_6 | 5473 | 6423 | - | 9.B.146.1.6 |
Gene ID: Rep_1332_c_19_3
Type: CAZyme
Location: 1939 - 3021 (-)
Type: CAZyme
Location: 1939 - 3021 (-)
Gene ID: Rep_1332_c_19_4
Type: TC
Location: 3018 - 4145 (-)
Type: TC
Location: 3018 - 4145 (-)
Gene ID: Rep_1332_c_19_5
Type: pfam
Location: 4146 - 5465 (-)
Type: pfam
Location: 4146 - 5465 (-)
Gene ID: Rep_1332_c_19_6
Type: TC
Location: 5473 - 6423 (-)
Type: TC
Location: 5473 - 6423 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A raoultii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.