Cluster: Rep_1332_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1332
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1332_c_4 | Rep_1332_c_4_8 | 6273 | 8027 | + | CE4 |
| pfam | Rep_1332_c_4 | Rep_1332_c_4_9 | 8216 | 9160 | + | PBP_like_2 | PBP_like_2 |
| TC | Rep_1332_c_4 | Rep_1332_c_4_10 | 9194 | 10099 | + | 3.A.1.7.5 |
| TC | Rep_1332_c_4 | Rep_1332_c_4_11 | 10096 | 10971 | + | 3.A.1.7.5 |
| TC | Rep_1332_c_4 | Rep_1332_c_4_12 | 10971 | 11726 | + | 3.A.1.7.5 |
Gene ID: Rep_1332_c_4_8
Type: CAZyme
Location: 6273 - 8027 (+)
Type: CAZyme
Location: 6273 - 8027 (+)
Gene ID: Rep_1332_c_4_9
Type: pfam
Location: 8216 - 9160 (+)
Type: pfam
Location: 8216 - 9160 (+)
Gene ID: Rep_1332_c_4_10
Type: TC
Location: 9194 - 10099 (+)
Type: TC
Location: 9194 - 10099 (+)
Gene ID: Rep_1332_c_4_11
Type: TC
Location: 10096 - 10971 (+)
Type: TC
Location: 10096 - 10971 (+)
Gene ID: Rep_1332_c_4_12
Type: TC
Location: 10971 - 11726 (+)
Type: TC
Location: 10971 - 11726 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A raoultii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.