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Cluster: Rep_132_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_132_c_26 Rep_132_c_26_8 7756 8922 + GT4
CAZyme Rep_132_c_26 Rep_132_c_26_9 8919 10022 + GT4
CAZyme Rep_132_c_26 Rep_132_c_26_10 10025 11212 + GT4
pfam Rep_132_c_26 Rep_132_c_26_11 11209 12267 + Acyl_transf_3
CAZyme Rep_132_c_26 Rep_132_c_26_12 12236 13390 + GT4
pfam Rep_132_c_26 Rep_132_c_26_13 13644 14321 + ATPgrasp_TupA
TC Rep_132_c_26 Rep_132_c_26_14 14400 15473 + 9.B.18.2.1
Gene ID: Rep_132_c_26_8
Type: CAZyme
Location: 7756 - 8922 (+)
Gene ID: Rep_132_c_26_9
Type: CAZyme
Location: 8919 - 10022 (+)
Gene ID: Rep_132_c_26_10
Type: CAZyme
Location: 10025 - 11212 (+)
Gene ID: Rep_132_c_26_11
Type: pfam
Location: 11209 - 12267 (+)
Gene ID: Rep_132_c_26_12
Type: CAZyme
Location: 12236 - 13390 (+)
Gene ID: Rep_132_c_26_13
Type: pfam
Location: 13644 - 14321 (+)
Gene ID: Rep_132_c_26_14
Type: TC
Location: 14400 - 15473 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_132_c_26_14 vegan > omnivore 1.04555 0.03783

🧭 Explore Read Mapping of CGC

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