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Cluster: Rep_132_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_132_c_56 Rep_132_c_56_1 1094 1744 + 9.B.18.1.3
TC Rep_132_c_56 Rep_132_c_56_2 1747 4278 + 1.B.18.1.2
pfam Rep_132_c_56 Rep_132_c_56_3 4353 5438 + Wzz | GNVR
TC Rep_132_c_56 Rep_132_c_56_4 5422 6690 + 2.A.66.2.1
pfam Rep_132_c_56 Rep_132_c_56_5 6684 7877 + O_anti_polymase
CAZyme Rep_132_c_56 Rep_132_c_56_6 7865 8788 + GT2
CAZyme Rep_132_c_56 Rep_132_c_56_7 8806 9900 + GT4
CAZyme Rep_132_c_56 Rep_132_c_56_8 9904 11031 + GT4
Gene ID: Rep_132_c_56_1
Type: TC
Location: 1094 - 1744 (+)
Gene ID: Rep_132_c_56_2
Type: TC
Location: 1747 - 4278 (+)
Gene ID: Rep_132_c_56_3
Type: pfam
Location: 4353 - 5438 (+)
Gene ID: Rep_132_c_56_4
Type: TC
Location: 5422 - 6690 (+)
Gene ID: Rep_132_c_56_5
Type: pfam
Location: 6684 - 7877 (+)
Gene ID: Rep_132_c_56_6
Type: CAZyme
Location: 7865 - 8788 (+)
Gene ID: Rep_132_c_56_7
Type: CAZyme
Location: 8806 - 9900 (+)
Gene ID: Rep_132_c_56_8
Type: CAZyme
Location: 9904 - 11031 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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