Cluster: Rep_1324_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1324
- CGC Family ID: CGCFAM_03611
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1324_c_33 | Rep_1324_c_33_15 | 18229 | 18870 | + | 3.A.1.124.3 |
| pfam | Rep_1324_c_33 | Rep_1324_c_33_16 | 18910 | 20274 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| pfam | Rep_1324_c_33 | Rep_1324_c_33_17 | 20277 | 21329 | - | Dala_Dala_lig_N | ATP-grasp | Dala_Dala_lig_C |
| CAZyme | Rep_1324_c_33 | Rep_1324_c_33_18 | 21502 | 23880 | + | GT35 |
| NULL(UNKNOWN) | Rep_1324_c_33 | Rep_1324_c_33_19 | 23867 | 24202 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1324_c_33 | Rep_1324_c_33_20 | 24212 | 25261 | + | 1.A.35.3.2 |
Gene ID: Rep_1324_c_33_15
Type: TC
Location: 18229 - 18870 (+)
Type: TC
Location: 18229 - 18870 (+)
Gene ID: Rep_1324_c_33_16
Type: pfam
Location: 18910 - 20274 (-)
Type: pfam
Location: 18910 - 20274 (-)
Gene ID: Rep_1324_c_33_17
Type: pfam
Location: 20277 - 21329 (-)
Type: pfam
Location: 20277 - 21329 (-)
Gene ID: Rep_1324_c_33_18
Type: CAZyme
Location: 21502 - 23880 (+)
Type: CAZyme
Location: 21502 - 23880 (+)
Gene ID: Rep_1324_c_33_19
Type:
Location: 23867 - 24202 (+)
Type:
Location: 23867 - 24202 (+)
Gene ID: Rep_1324_c_33_20
Type: TC
Location: 24212 - 25261 (+)
Type: TC
Location: 24212 - 25261 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Finegoldia
Species
Finegoldia sp900766215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.