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Cluster: Rep_1319_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1319_c_50 Rep_1319_c_50_1 145 996 - 3.D.6.1.3
TC Rep_1319_c_50 Rep_1319_c_50_2 1007 1588 - 3.D.6.1.2
TC Rep_1319_c_50 Rep_1319_c_50_3 1588 2217 - 3.D.6.1.3
pfam Rep_1319_c_50 Rep_1319_c_50_4 2228 2800 - FMN_bind
TC Rep_1319_c_50 Rep_1319_c_50_5 2797 3768 - 3.D.6.1.2
TC Rep_1319_c_50 Rep_1319_c_50_6 3772 5061 - 3.D.6.1.2
CAZyme Rep_1319_c_50 Rep_1319_c_50_7 5244 5885 - GH23
Gene ID: Rep_1319_c_50_1
Type: TC
Location: 145 - 996 (-)
Gene ID: Rep_1319_c_50_2
Type: TC
Location: 1007 - 1588 (-)
Gene ID: Rep_1319_c_50_3
Type: TC
Location: 1588 - 2217 (-)
Gene ID: Rep_1319_c_50_4
Type: pfam
Location: 2228 - 2800 (-)
Gene ID: Rep_1319_c_50_5
Type: TC
Location: 2797 - 3768 (-)
Gene ID: Rep_1319_c_50_6
Type: TC
Location: 3772 - 5061 (-)
Gene ID: Rep_1319_c_50_7
Type: CAZyme
Location: 5244 - 5885 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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