Cluster: Rep_1319_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1319
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1319_c_17 | Rep_1319_c_17_19 | 15942 | 17408 | + | 2.A.114.1.2 |
| TF | Rep_1319_c_17 | Rep_1319_c_17_20 | 17530 | 18177 | + | 0045030 |
| STP | Rep_1319_c_17 | Rep_1319_c_17_21 | 18279 | 18824 | + | Hemerythrin |
| CAZyme | Rep_1319_c_17 | Rep_1319_c_17_22 | 18937 | 20091 | + | GT4 |
| pfam | Rep_1319_c_17 | Rep_1319_c_17_23 | 20072 | 20695 | + | VTT_dom |
| CAZyme | Rep_1319_c_17 | Rep_1319_c_17_24 | 20702 | 21700 | + | GT4 |
Gene ID: Rep_1319_c_17_19
Type: TC
Location: 15942 - 17408 (+)
Type: TC
Location: 15942 - 17408 (+)
Gene ID: Rep_1319_c_17_20
Type: TF
Location: 17530 - 18177 (+)
Type: TF
Location: 17530 - 18177 (+)
Gene ID: Rep_1319_c_17_21
Type: STP
Location: 18279 - 18824 (+)
Type: STP
Location: 18279 - 18824 (+)
Gene ID: Rep_1319_c_17_22
Type: CAZyme
Location: 18937 - 20091 (+)
Type: CAZyme
Location: 18937 - 20091 (+)
Gene ID: Rep_1319_c_17_23
Type: pfam
Location: 20072 - 20695 (+)
Type: pfam
Location: 20072 - 20695 (+)
Gene ID: Rep_1319_c_17_24
Type: CAZyme
Location: 20702 - 21700 (+)
Type: CAZyme
Location: 20702 - 21700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Finegoldia
Species
Finegoldia magna_F
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.