dbCAN Logo

Cluster: Rep_1318_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1318_c_8 Rep_1318_c_8_4 4237 4878 + GH23
TC Rep_1318_c_8 Rep_1318_c_8_5 5022 6350 + 3.D.6.1.2
TC Rep_1318_c_8 Rep_1318_c_8_6 6354 7325 + 3.D.6.1.2
pfam Rep_1318_c_8 Rep_1318_c_8_7 7322 7894 + FMN_bind
TC Rep_1318_c_8 Rep_1318_c_8_8 7905 8534 + 3.D.6.1.3
TC Rep_1318_c_8 Rep_1318_c_8_9 8534 9115 + 3.D.6.1.2
TC Rep_1318_c_8 Rep_1318_c_8_10 9126 9977 + 3.D.6.1.3
Gene ID: Rep_1318_c_8_4
Type: CAZyme
Location: 4237 - 4878 (+)
Gene ID: Rep_1318_c_8_5
Type: TC
Location: 5022 - 6350 (+)
Gene ID: Rep_1318_c_8_6
Type: TC
Location: 6354 - 7325 (+)
Gene ID: Rep_1318_c_8_7
Type: pfam
Location: 7322 - 7894 (+)
Gene ID: Rep_1318_c_8_8
Type: TC
Location: 7905 - 8534 (+)
Gene ID: Rep_1318_c_8_9
Type: TC
Location: 8534 - 9115 (+)
Gene ID: Rep_1318_c_8_10
Type: TC
Location: 9126 - 9977 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List