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Cluster: Rep_1316_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1316_c_99 Rep_1316_c_99_1 279 1544 - 2.A.40.1.1
TC Rep_1316_c_99 Rep_1316_c_99_2 1751 2173 + 4.A.2.1.21
TC Rep_1316_c_99 Rep_1316_c_99_3 2175 2492 + 4.A.2.1.11
TC Rep_1316_c_99 Rep_1316_c_99_4 2502 3731 + 4.A.2.1.11
CAZyme Rep_1316_c_99 Rep_1316_c_99_5 3728 6280 + GH38
TF Rep_1316_c_99 Rep_1316_c_99_6 6290 8059 + HTH_11 | Mga
TC Rep_1316_c_99 Rep_1316_c_99_7 8234 9463 + 2.A.23.1.5
Gene ID: Rep_1316_c_99_1
Type: TC
Location: 279 - 1544 (-)
Gene ID: Rep_1316_c_99_2
Type: TC
Location: 1751 - 2173 (+)
Gene ID: Rep_1316_c_99_3
Type: TC
Location: 2175 - 2492 (+)
Gene ID: Rep_1316_c_99_4
Type: TC
Location: 2502 - 3731 (+)
Gene ID: Rep_1316_c_99_5
Type: CAZyme
Location: 3728 - 6280 (+)
Gene ID: Rep_1316_c_99_6
Type: TF
Location: 6290 - 8059 (+)
Gene ID: Rep_1316_c_99_7
Type: TC
Location: 8234 - 9463 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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