Cluster: Rep_1316_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1316
- CGC Family ID: CGCFAM_04093
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1316_c_67 | Rep_1316_c_67_4 | 3335 | 4030 | + | 3.A.1.147.2 |
| NULL(UNKNOWN) | Rep_1316_c_67 | Rep_1316_c_67_5 | 4032 | 5624 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1316_c_67 | Rep_1316_c_67_6 | 5637 | 5987 | - | SdpI |
| CAZyme | Rep_1316_c_67 | Rep_1316_c_67_7 | 6097 | 7257 | + | GT4 |
| CAZyme | Rep_1316_c_67 | Rep_1316_c_67_8 | 7226 | 8227 | + | GT4 |
Gene ID: Rep_1316_c_67_4
Type: TC
Location: 3335 - 4030 (+)
Type: TC
Location: 3335 - 4030 (+)
Gene ID: Rep_1316_c_67_5
Type:
Location: 4032 - 5624 (+)
Type:
Location: 4032 - 5624 (+)
Gene ID: Rep_1316_c_67_6
Type: pfam
Location: 5637 - 5987 (-)
Type: pfam
Location: 5637 - 5987 (-)
Gene ID: Rep_1316_c_67_7
Type: CAZyme
Location: 6097 - 7257 (+)
Type: CAZyme
Location: 6097 - 7257 (+)
Gene ID: Rep_1316_c_67_8
Type: CAZyme
Location: 7226 - 8227 (+)
Type: CAZyme
Location: 7226 - 8227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp900232825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.