Cluster: Rep_1316_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1316
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1316_c_111 | Rep_1316_c_111_7 | 6599 | 8029 | + | GT5 |
| CAZyme | Rep_1316_c_111 | Rep_1316_c_111_8 | 8010 | 10295 | + | GT35 |
| CAZyme | Rep_1316_c_111 | Rep_1316_c_111_9 | 10237 | 12153 | + | GH13_14 |
| pfam | Rep_1316_c_111 | Rep_1316_c_111_10 | 12155 | 13846 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| STP | Rep_1316_c_111 | Rep_1316_c_111_11 | 14037 | 14540 | + | FHA |
| TC | Rep_1316_c_111 | Rep_1316_c_111_12 | 14533 | 15792 | + | 2.A.103.1.3 |
Gene ID: Rep_1316_c_111_7
Type: CAZyme
Location: 6599 - 8029 (+)
Type: CAZyme
Location: 6599 - 8029 (+)
Gene ID: Rep_1316_c_111_8
Type: CAZyme
Location: 8010 - 10295 (+)
Type: CAZyme
Location: 8010 - 10295 (+)
Gene ID: Rep_1316_c_111_9
Type: CAZyme
Location: 10237 - 12153 (+)
Type: CAZyme
Location: 10237 - 12153 (+)
Gene ID: Rep_1316_c_111_10
Type: pfam
Location: 12155 - 13846 (+)
Type: pfam
Location: 12155 - 13846 (+)
Gene ID: Rep_1316_c_111_11
Type: STP
Location: 14037 - 14540 (+)
Type: STP
Location: 14037 - 14540 (+)
Gene ID: Rep_1316_c_111_12
Type: TC
Location: 14533 - 15792 (+)
Type: TC
Location: 14533 - 15792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp900232825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.