Cluster: Rep_1316_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1316
- CGC Family ID: CGCFAM_01793
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1316_c_104 | Rep_1316_c_104_1 | 3 | 1850 | - | GH13_8 |
| pfam | Rep_1316_c_104 | Rep_1316_c_104_2 | 1870 | 3927 | - | GTP_EFTU | EFG_C | MMR_HSR1 | EFG_IV | EFG_III | EF-G_D2 |
| pfam | Rep_1316_c_104 | Rep_1316_c_104_3 | 4066 | 4434 | - | DUF956 |
| TC | Rep_1316_c_104 | Rep_1316_c_104_4 | 4438 | 5406 | - | 4.A.6.1.15 |
| TC | Rep_1316_c_104 | Rep_1316_c_104_5 | 5418 | 6233 | - | 4.A.6.1.15 |
| TC | Rep_1316_c_104 | Rep_1316_c_104_6 | 6243 | 7241 | - | 4.A.6.1.15 |
Gene ID: Rep_1316_c_104_1
Type: CAZyme
Location: 3 - 1850 (-)
Type: CAZyme
Location: 3 - 1850 (-)
Gene ID: Rep_1316_c_104_2
Type: pfam
Location: 1870 - 3927 (-)
Type: pfam
Location: 1870 - 3927 (-)
Gene ID: Rep_1316_c_104_3
Type: pfam
Location: 4066 - 4434 (-)
Type: pfam
Location: 4066 - 4434 (-)
Gene ID: Rep_1316_c_104_4
Type: TC
Location: 4438 - 5406 (-)
Type: TC
Location: 4438 - 5406 (-)
Gene ID: Rep_1316_c_104_5
Type: TC
Location: 5418 - 6233 (-)
Type: TC
Location: 5418 - 6233 (-)
Gene ID: Rep_1316_c_104_6
Type: TC
Location: 6243 - 7241 (-)
Type: TC
Location: 6243 - 7241 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp900232825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.