Cluster: Rep_1311_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1311
- CGC Family ID: CGCFAM_00452
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1311_c_83 | Rep_1311_c_83_3 | 2905 | 4464 | + | 4.A.1.1.3 |
| CAZyme | Rep_1311_c_83 | Rep_1311_c_83_4 | 4477 | 5808 | + | GH4 |
| CAZyme | Rep_1311_c_83 | Rep_1311_c_83_5 | 5964 | 8279 | - | GH95 |
| TC | Rep_1311_c_83 | Rep_1311_c_83_6 | 8307 | 8618 | - | 4.A.3.2.2 |
| TC | Rep_1311_c_83 | Rep_1311_c_83_7 | 8631 | 9896 | - | 4.A.3.2.2 |
| TC | Rep_1311_c_83 | Rep_1311_c_83_8 | 9898 | 10206 | - | 4.A.3.2.2 |
Gene ID: Rep_1311_c_83_3
Type: TC
Location: 2905 - 4464 (+)
Type: TC
Location: 2905 - 4464 (+)
Gene ID: Rep_1311_c_83_4
Type: CAZyme
Location: 4477 - 5808 (+)
Type: CAZyme
Location: 4477 - 5808 (+)
Gene ID: Rep_1311_c_83_5
Type: CAZyme
Location: 5964 - 8279 (-)
Type: CAZyme
Location: 5964 - 8279 (-)
Gene ID: Rep_1311_c_83_6
Type: TC
Location: 8307 - 8618 (-)
Type: TC
Location: 8307 - 8618 (-)
Gene ID: Rep_1311_c_83_7
Type: TC
Location: 8631 - 9896 (-)
Type: TC
Location: 8631 - 9896 (-)
Gene ID: Rep_1311_c_83_8
Type: TC
Location: 9898 - 10206 (-)
Type: TC
Location: 9898 - 10206 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus vaginalis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.