Cluster: Rep_1311_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1311
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1311_c_38 | Rep_1311_c_38_2 | 171 | 1244 | - | GT28 |
| pfam | Rep_1311_c_38 | Rep_1311_c_38_3 | 1241 | 2554 | - | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_1311_c_38 | Rep_1311_c_38_4 | 2551 | 3501 | - | 9.B.146.1.6 |
Gene ID: Rep_1311_c_38_2
Type: CAZyme
Location: 171 - 1244 (-)
Type: CAZyme
Location: 171 - 1244 (-)
Gene ID: Rep_1311_c_38_3
Type: pfam
Location: 1241 - 2554 (-)
Type: pfam
Location: 1241 - 2554 (-)
Gene ID: Rep_1311_c_38_4
Type: TC
Location: 2551 - 3501 (-)
Type: TC
Location: 2551 - 3501 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus vaginalis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.