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Cluster: Rep_1310_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1310_c_51 Rep_1310_c_51_2 196 1290 - 3.A.1.1.22
pfam Rep_1310_c_51 Rep_1310_c_51_3 1283 2533 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC Rep_1310_c_51 Rep_1310_c_51_4 2541 3287 - 3.A.1.1.36
TC Rep_1310_c_51 Rep_1310_c_51_5 3361 4209 - 3.A.1.1.20
TC Rep_1310_c_51 Rep_1310_c_51_6 4287 5561 - 3.A.1.1.44
NULL(UNKNOWN) Rep_1310_c_51 Rep_1310_c_51_7 6943 7659 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1310_c_51 Rep_1310_c_51_8 7773 10052 - Strep_his_triad | Strep_his_triad | Strep_his_triad | Strep_his_triad | Strep_his_triad | DUF5633
TC Rep_1310_c_51 Rep_1310_c_51_9 10063 10857 - 3.A.1.15.11
TC Rep_1310_c_51 Rep_1310_c_51_10 10864 11373 - 3.A.1.15.4
NULL(UNKNOWN) Rep_1310_c_51 Rep_1310_c_51_11 11439 11849 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1310_c_51 Rep_1310_c_51_12 11866 13377 - GH73
Gene ID: Rep_1310_c_51_2
Type: TC
Location: 196 - 1290 (-)
Gene ID: Rep_1310_c_51_3
Type: pfam
Location: 1283 - 2533 (-)
Gene ID: Rep_1310_c_51_4
Type: TC
Location: 2541 - 3287 (-)
Gene ID: Rep_1310_c_51_5
Type: TC
Location: 3361 - 4209 (-)
Gene ID: Rep_1310_c_51_6
Type: TC
Location: 4287 - 5561 (-)
Gene ID: Rep_1310_c_51_7
Type:
Location: 6943 - 7659 (-)
Gene ID: Rep_1310_c_51_8
Type: pfam
Location: 7773 - 10052 (-)
Gene ID: Rep_1310_c_51_9
Type: TC
Location: 10063 - 10857 (-)
Gene ID: Rep_1310_c_51_10
Type: TC
Location: 10864 - 11373 (-)
Gene ID: Rep_1310_c_51_11
Type:
Location: 11439 - 11849 (-)
Gene ID: Rep_1310_c_51_12
Type: CAZyme
Location: 11866 - 13377 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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