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Cluster: Rep_1310_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1310_c_34 Rep_1310_c_34_121 86975 87985 - 1.A.33.1.5
pfam Rep_1310_c_34 Rep_1310_c_34_122 87995 88675 - RadC | UPF0758_N
TC Rep_1310_c_34 Rep_1310_c_34_123 88672 89187 - 2.A.87.3.1
pfam Rep_1310_c_34 Rep_1310_c_34_124 89187 89576 - NusG_II
TC Rep_1310_c_34 Rep_1310_c_34_125 89796 90593 - 3.D.6.1.2
TC Rep_1310_c_34 Rep_1310_c_34_126 90603 91181 - 3.D.6.1.2
TC Rep_1310_c_34 Rep_1310_c_34_127 91190 91813 - 3.D.6.1.2
pfam Rep_1310_c_34 Rep_1310_c_34_128 91822 92367 - FMN_bind
TC Rep_1310_c_34 Rep_1310_c_34_129 92360 93340 - 3.D.6.1.2
TC Rep_1310_c_34 Rep_1310_c_34_130 93349 94677 - 3.D.6.1.2
CAZyme Rep_1310_c_34 Rep_1310_c_34_131 94746 95402 - GH23
Gene ID: Rep_1310_c_34_121
Type: TC
Location: 86975 - 87985 (-)
Gene ID: Rep_1310_c_34_122
Type: pfam
Location: 87995 - 88675 (-)
Gene ID: Rep_1310_c_34_123
Type: TC
Location: 88672 - 89187 (-)
Gene ID: Rep_1310_c_34_124
Type: pfam
Location: 89187 - 89576 (-)
Gene ID: Rep_1310_c_34_125
Type: TC
Location: 89796 - 90593 (-)
Gene ID: Rep_1310_c_34_126
Type: TC
Location: 90603 - 91181 (-)
Gene ID: Rep_1310_c_34_127
Type: TC
Location: 91190 - 91813 (-)
Gene ID: Rep_1310_c_34_128
Type: pfam
Location: 91822 - 92367 (-)
Gene ID: Rep_1310_c_34_129
Type: TC
Location: 92360 - 93340 (-)
Gene ID: Rep_1310_c_34_130
Type: TC
Location: 93349 - 94677 (-)
Gene ID: Rep_1310_c_34_131
Type: CAZyme
Location: 94746 - 95402 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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