Cluster: Rep_1310_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1310
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1310_c_33 | Rep_1310_c_33_228 | 225492 | 226760 | - | 2.A.103.1.3 |
| STP | Rep_1310_c_33 | Rep_1310_c_33_229 | 226753 | 227256 | - | FHA |
| pfam | Rep_1310_c_33 | Rep_1310_c_33_230 | 227351 | 229045 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | Rep_1310_c_33 | Rep_1310_c_33_231 | 229035 | 230942 | - | GH13_14 |
| CAZyme | Rep_1310_c_33 | Rep_1310_c_33_232 | 230905 | 233184 | - | GT35 |
| CAZyme | Rep_1310_c_33 | Rep_1310_c_33_233 | 233193 | 234623 | - | GT5 |
Gene ID: Rep_1310_c_33_228
Type: TC
Location: 225492 - 226760 (-)
Type: TC
Location: 225492 - 226760 (-)
Gene ID: Rep_1310_c_33_229
Type: STP
Location: 226753 - 227256 (-)
Type: STP
Location: 226753 - 227256 (-)
Gene ID: Rep_1310_c_33_230
Type: pfam
Location: 227351 - 229045 (-)
Type: pfam
Location: 227351 - 229045 (-)
Gene ID: Rep_1310_c_33_231
Type: CAZyme
Location: 229035 - 230942 (-)
Type: CAZyme
Location: 229035 - 230942 (-)
Gene ID: Rep_1310_c_33_232
Type: CAZyme
Location: 230905 - 233184 (-)
Type: CAZyme
Location: 230905 - 233184 (-)
Gene ID: Rep_1310_c_33_233
Type: CAZyme
Location: 233193 - 234623 (-)
Type: CAZyme
Location: 233193 - 234623 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp900258475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.