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Cluster: Rep_1310_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1310_c_31 Rep_1310_c_31_17 23431 23766 + 4.A.3.2.8
TC Rep_1310_c_31 Rep_1310_c_31_18 23763 24080 + 4.A.3.2.6
CAZyme Rep_1310_c_31 Rep_1310_c_31_19 24088 25443 + GH1
TC Rep_1310_c_31 Rep_1310_c_31_20 25436 26749 + 4.A.3.2.9
pfam Rep_1310_c_31 Rep_1310_c_31_21 26887 27723 + PRD | PRD | CAT_RBD
TC Rep_1310_c_31 Rep_1310_c_31_22 27777 28970 + 4.A.1.2.6
TC Rep_1310_c_31 Rep_1310_c_31_23 28997 29662 + 4.A.1.2.11
CAZyme Rep_1310_c_31 Rep_1310_c_31_24 29672 31102 + GH1
Gene ID: Rep_1310_c_31_17
Type: TC
Location: 23431 - 23766 (+)
Gene ID: Rep_1310_c_31_18
Type: TC
Location: 23763 - 24080 (+)
Gene ID: Rep_1310_c_31_19
Type: CAZyme
Location: 24088 - 25443 (+)
Gene ID: Rep_1310_c_31_20
Type: TC
Location: 25436 - 26749 (+)
Gene ID: Rep_1310_c_31_21
Type: pfam
Location: 26887 - 27723 (+)
Gene ID: Rep_1310_c_31_22
Type: TC
Location: 27777 - 28970 (+)
Gene ID: Rep_1310_c_31_23
Type: TC
Location: 28997 - 29662 (+)
Gene ID: Rep_1310_c_31_24
Type: CAZyme
Location: 29672 - 31102 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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