Cluster: Rep_1310_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1310
- CGC Family ID: CGCFAM_04465
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1310_c_31 | Rep_1310_c_31_2 | 812 | 3484 | + | 3.A.3.2.21 |
| CAZyme | Rep_1310_c_31 | Rep_1310_c_31_3 | 3628 | 5742 | + | GH92 |
| CAZyme | Rep_1310_c_31 | Rep_1310_c_31_4 | 5732 | 9016 | + | GH2 |
| pfam | Rep_1310_c_31 | Rep_1310_c_31_5 | 9073 | 9885 | + | PRiA4_ORF3 | PRiA4_ORF3 |
| TC | Rep_1310_c_31 | Rep_1310_c_31_6 | 9894 | 10454 | - | 2.A.51.1.6 |
| TC | Rep_1310_c_31 | Rep_1310_c_31_7 | 10447 | 10983 | - | 2.A.51.1.6 |
Gene ID: Rep_1310_c_31_2
Type: TC
Location: 812 - 3484 (+)
Type: TC
Location: 812 - 3484 (+)
Gene ID: Rep_1310_c_31_3
Type: CAZyme
Location: 3628 - 5742 (+)
Type: CAZyme
Location: 3628 - 5742 (+)
Gene ID: Rep_1310_c_31_4
Type: CAZyme
Location: 5732 - 9016 (+)
Type: CAZyme
Location: 5732 - 9016 (+)
Gene ID: Rep_1310_c_31_5
Type: pfam
Location: 9073 - 9885 (+)
Type: pfam
Location: 9073 - 9885 (+)
Gene ID: Rep_1310_c_31_6
Type: TC
Location: 9894 - 10454 (-)
Type: TC
Location: 9894 - 10454 (-)
Gene ID: Rep_1310_c_31_7
Type: TC
Location: 10447 - 10983 (-)
Type: TC
Location: 10447 - 10983 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp900258475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.