Cluster: Rep_1309_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1309
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1309_c_9 | Rep_1309_c_9_4 | 2888 | 4153 | - | 2.A.103.1.3 |
| STP | Rep_1309_c_9 | Rep_1309_c_9_5 | 4146 | 4649 | - | FHA |
| pfam | Rep_1309_c_9 | Rep_1309_c_9_6 | 4749 | 6443 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | Rep_1309_c_9 | Rep_1309_c_9_7 | 6433 | 8328 | - | GH13_14 |
| CAZyme | Rep_1309_c_9 | Rep_1309_c_9_8 | 8315 | 10570 | - | GT35 |
| CAZyme | Rep_1309_c_9 | Rep_1309_c_9_9 | 10576 | 12006 | - | GT5 |
Gene ID: Rep_1309_c_9_4
Type: TC
Location: 2888 - 4153 (-)
Type: TC
Location: 2888 - 4153 (-)
Gene ID: Rep_1309_c_9_5
Type: STP
Location: 4146 - 4649 (-)
Type: STP
Location: 4146 - 4649 (-)
Gene ID: Rep_1309_c_9_6
Type: pfam
Location: 4749 - 6443 (-)
Type: pfam
Location: 4749 - 6443 (-)
Gene ID: Rep_1309_c_9_7
Type: CAZyme
Location: 6433 - 8328 (-)
Type: CAZyme
Location: 6433 - 8328 (-)
Gene ID: Rep_1309_c_9_8
Type: CAZyme
Location: 8315 - 10570 (-)
Type: CAZyme
Location: 8315 - 10570 (-)
Gene ID: Rep_1309_c_9_9
Type: CAZyme
Location: 10576 - 12006 (-)
Type: CAZyme
Location: 10576 - 12006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus murdochii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.