Cluster: Rep_1309_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1309
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1309_c_3 | Rep_1309_c_3_28 | 31298 | 31711 | - | 2.A.7.2.1 |
| pfam | Rep_1309_c_3 | Rep_1309_c_3_29 | 31756 | 31977 | - | PC4 |
| CAZyme | Rep_1309_c_3 | Rep_1309_c_3_30 | 32013 | 33053 | - | GH25 |
| pfam | Rep_1309_c_3 | Rep_1309_c_3_31 | 33050 | 33535 | - | PMSR |
| pfam | Rep_1309_c_3 | Rep_1309_c_3_32 | 33535 | 34008 | - | ThrE | ThrE_2 |
| TC | Rep_1309_c_3 | Rep_1309_c_3_33 | 34010 | 34792 | - | 2.A.79.1.4 |
| pfam | Rep_1309_c_3 | Rep_1309_c_3_34 | 34801 | 35601 | - | DnaJ |
| TC | Rep_1309_c_3 | Rep_1309_c_3_35 | 35683 | 37458 | - | 3.A.1.106.2 |
Gene ID: Rep_1309_c_3_28
Type: TC
Location: 31298 - 31711 (-)
Type: TC
Location: 31298 - 31711 (-)
Gene ID: Rep_1309_c_3_29
Type: pfam
Location: 31756 - 31977 (-)
Type: pfam
Location: 31756 - 31977 (-)
Gene ID: Rep_1309_c_3_30
Type: CAZyme
Location: 32013 - 33053 (-)
Type: CAZyme
Location: 32013 - 33053 (-)
Gene ID: Rep_1309_c_3_31
Type: pfam
Location: 33050 - 33535 (-)
Type: pfam
Location: 33050 - 33535 (-)
Gene ID: Rep_1309_c_3_32
Type: pfam
Location: 33535 - 34008 (-)
Type: pfam
Location: 33535 - 34008 (-)
Gene ID: Rep_1309_c_3_33
Type: TC
Location: 34010 - 34792 (-)
Type: TC
Location: 34010 - 34792 (-)
Gene ID: Rep_1309_c_3_34
Type: pfam
Location: 34801 - 35601 (-)
Type: pfam
Location: 34801 - 35601 (-)
Gene ID: Rep_1309_c_3_35
Type: TC
Location: 35683 - 37458 (-)
Type: TC
Location: 35683 - 37458 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus murdochii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.