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Cluster: Rep_1309_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1309_c_24 Rep_1309_c_24_2 594 1112 - 2.A.87.3.1
pfam Rep_1309_c_24 Rep_1309_c_24_3 1112 1501 - NusG_II
TC Rep_1309_c_24 Rep_1309_c_24_4 1603 2403 - 3.D.6.1.1
TC Rep_1309_c_24 Rep_1309_c_24_5 2413 2988 - 3.D.6.1.2
TC Rep_1309_c_24 Rep_1309_c_24_6 2997 3626 - 3.D.6.1.2
pfam Rep_1309_c_24 Rep_1309_c_24_7 3635 4177 - FMN_bind
TC Rep_1309_c_24 Rep_1309_c_24_8 4170 5150 - 3.D.6.1.2
TC Rep_1309_c_24 Rep_1309_c_24_9 5159 6487 - 3.D.6.1.2
CAZyme Rep_1309_c_24 Rep_1309_c_24_10 6561 7217 - GH23
Gene ID: Rep_1309_c_24_2
Type: TC
Location: 594 - 1112 (-)
Gene ID: Rep_1309_c_24_3
Type: pfam
Location: 1112 - 1501 (-)
Gene ID: Rep_1309_c_24_4
Type: TC
Location: 1603 - 2403 (-)
Gene ID: Rep_1309_c_24_5
Type: TC
Location: 2413 - 2988 (-)
Gene ID: Rep_1309_c_24_6
Type: TC
Location: 2997 - 3626 (-)
Gene ID: Rep_1309_c_24_7
Type: pfam
Location: 3635 - 4177 (-)
Gene ID: Rep_1309_c_24_8
Type: TC
Location: 4170 - 5150 (-)
Gene ID: Rep_1309_c_24_9
Type: TC
Location: 5159 - 6487 (-)
Gene ID: Rep_1309_c_24_10
Type: CAZyme
Location: 6561 - 7217 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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