Cluster: Rep_1308_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1308
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1308_c_96 | Rep_1308_c_96_8 | 5292 | 5705 | - | 2.A.7.2.1 |
| pfam | Rep_1308_c_96 | Rep_1308_c_96_9 | 5750 | 5971 | - | PC4 |
| CAZyme | Rep_1308_c_96 | Rep_1308_c_96_10 | 6007 | 7047 | - | GH25 |
| pfam | Rep_1308_c_96 | Rep_1308_c_96_11 | 7044 | 7529 | - | PMSR |
| pfam | Rep_1308_c_96 | Rep_1308_c_96_12 | 7529 | 8002 | - | ThrE | ThrE_2 |
| TC | Rep_1308_c_96 | Rep_1308_c_96_13 | 8004 | 8786 | - | 2.A.79.1.4 |
| pfam | Rep_1308_c_96 | Rep_1308_c_96_14 | 8795 | 9595 | - | DnaJ |
| TC | Rep_1308_c_96 | Rep_1308_c_96_15 | 9679 | 11454 | - | 3.A.1.106.2 |
Gene ID: Rep_1308_c_96_8
Type: TC
Location: 5292 - 5705 (-)
Type: TC
Location: 5292 - 5705 (-)
Gene ID: Rep_1308_c_96_9
Type: pfam
Location: 5750 - 5971 (-)
Type: pfam
Location: 5750 - 5971 (-)
Gene ID: Rep_1308_c_96_10
Type: CAZyme
Location: 6007 - 7047 (-)
Type: CAZyme
Location: 6007 - 7047 (-)
Gene ID: Rep_1308_c_96_11
Type: pfam
Location: 7044 - 7529 (-)
Type: pfam
Location: 7044 - 7529 (-)
Gene ID: Rep_1308_c_96_12
Type: pfam
Location: 7529 - 8002 (-)
Type: pfam
Location: 7529 - 8002 (-)
Gene ID: Rep_1308_c_96_13
Type: TC
Location: 8004 - 8786 (-)
Type: TC
Location: 8004 - 8786 (-)
Gene ID: Rep_1308_c_96_14
Type: pfam
Location: 8795 - 9595 (-)
Type: pfam
Location: 8795 - 9595 (-)
Gene ID: Rep_1308_c_96_15
Type: TC
Location: 9679 - 11454 (-)
Type: TC
Location: 9679 - 11454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.