Cluster: Rep_1301_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1301
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1301_c_23 | Rep_1301_c_23_7 | 5140 | 5850 | - | 3.A.1.124.6 |
| pfam | Rep_1301_c_23 | Rep_1301_c_23_8 | 5851 | 6591 | - | ABC2_membrane |
| TC | Rep_1301_c_23 | Rep_1301_c_23_9 | 6581 | 7534 | - | 3.A.1.142.1 |
| STP | Rep_1301_c_23 | Rep_1301_c_23_10 | 7626 | 8243 | - | TetR_N |
| NULL(UNKNOWN) | Rep_1301_c_23 | Rep_1301_c_23_11 | 8545 | 8673 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1301_c_23 | Rep_1301_c_23_12 | 8670 | 11462 | - | GT51 |
Gene ID: Rep_1301_c_23_7
Type: TC
Location: 5140 - 5850 (-)
Type: TC
Location: 5140 - 5850 (-)
Gene ID: Rep_1301_c_23_8
Type: pfam
Location: 5851 - 6591 (-)
Type: pfam
Location: 5851 - 6591 (-)
Gene ID: Rep_1301_c_23_9
Type: TC
Location: 6581 - 7534 (-)
Type: TC
Location: 6581 - 7534 (-)
Gene ID: Rep_1301_c_23_10
Type: STP
Location: 7626 - 8243 (-)
Type: STP
Location: 7626 - 8243 (-)
Gene ID: Rep_1301_c_23_11
Type:
Location: 8545 - 8673 (-)
Type:
Location: 8545 - 8673 (-)
Gene ID: Rep_1301_c_23_12
Type: CAZyme
Location: 8670 - 11462 (-)
Type: CAZyme
Location: 8670 - 11462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_B
Species
Peptoniphilus_B duerdenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.