Cluster: Rep_1301_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1301
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1301_c_17 | Rep_1301_c_17_13 | 11285 | 12697 | + | 2.A.1.3.64 |
| pfam | Rep_1301_c_17 | Rep_1301_c_17_14 | 12817 | 13488 | - | CpXC |
| CAZyme | Rep_1301_c_17 | Rep_1301_c_17_15 | 13469 | 14698 | - | GT4 |
| TC | Rep_1301_c_17 | Rep_1301_c_17_16 | 14695 | 15612 | - | 3.A.1.20.2 |
| TC | Rep_1301_c_17 | Rep_1301_c_17_17 | 15602 | 17218 | - | 3.A.1.20.2 |
Gene ID: Rep_1301_c_17_13
Type: TC
Location: 11285 - 12697 (+)
Type: TC
Location: 11285 - 12697 (+)
Gene ID: Rep_1301_c_17_14
Type: pfam
Location: 12817 - 13488 (-)
Type: pfam
Location: 12817 - 13488 (-)
Gene ID: Rep_1301_c_17_15
Type: CAZyme
Location: 13469 - 14698 (-)
Type: CAZyme
Location: 13469 - 14698 (-)
Gene ID: Rep_1301_c_17_16
Type: TC
Location: 14695 - 15612 (-)
Type: TC
Location: 14695 - 15612 (-)
Gene ID: Rep_1301_c_17_17
Type: TC
Location: 15602 - 17218 (-)
Type: TC
Location: 15602 - 17218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_B
Species
Peptoniphilus_B duerdenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.