Cluster: Rep_1301_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1301
- CGC Family ID: CGCFAM_00386
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1301_c_15 | Rep_1301_c_15_19 | 17332 | 18225 | - | 3.A.1.124.3 |
| TF | Rep_1301_c_15 | Rep_1301_c_15_20 | 18353 | 19048 | + | Trans_reg_C |
| STP | Rep_1301_c_15 | Rep_1301_c_15_21 | 19051 | 20337 | + | HATPase_c |
| CAZyme | Rep_1301_c_15 | Rep_1301_c_15_22 | 20424 | 22853 | - | GT51 |
Gene ID: Rep_1301_c_15_19
Type: TC
Location: 17332 - 18225 (-)
Type: TC
Location: 17332 - 18225 (-)
Gene ID: Rep_1301_c_15_20
Type: TF
Location: 18353 - 19048 (+)
Type: TF
Location: 18353 - 19048 (+)
Gene ID: Rep_1301_c_15_21
Type: STP
Location: 19051 - 20337 (+)
Type: STP
Location: 19051 - 20337 (+)
Gene ID: Rep_1301_c_15_22
Type: CAZyme
Location: 20424 - 22853 (-)
Type: CAZyme
Location: 20424 - 22853 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_B
Species
Peptoniphilus_B duerdenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.