Cluster: Rep_1293_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1293
- CGC Family ID: CGCFAM_00643
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1293_c_41 | Rep_1293_c_41_7 | 9551 | 10759 | - | 9.A.40.2.1 |
| TC | Rep_1293_c_41 | Rep_1293_c_41_8 | 10930 | 12648 | + | 3.A.1.106.8 |
| TC | Rep_1293_c_41 | Rep_1293_c_41_9 | 12641 | 14389 | + | 3.A.1.106.8 |
| pfam | Rep_1293_c_41 | Rep_1293_c_41_10 | 14478 | 16433 | - | Transketolase_N | E1_dh | TPP_enzyme_C | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| CAZyme | Rep_1293_c_41 | Rep_1293_c_41_11 | 16430 | 17170 | - | GT26 |
| CAZyme | Rep_1293_c_41 | Rep_1293_c_41_12 | 17157 | 19361 | - | GT4 |
Gene ID: Rep_1293_c_41_7
Type: TC
Location: 9551 - 10759 (-)
Type: TC
Location: 9551 - 10759 (-)
Gene ID: Rep_1293_c_41_8
Type: TC
Location: 10930 - 12648 (+)
Type: TC
Location: 10930 - 12648 (+)
Gene ID: Rep_1293_c_41_9
Type: TC
Location: 12641 - 14389 (+)
Type: TC
Location: 12641 - 14389 (+)
Gene ID: Rep_1293_c_41_10
Type: pfam
Location: 14478 - 16433 (-)
Type: pfam
Location: 14478 - 16433 (-)
Gene ID: Rep_1293_c_41_11
Type: CAZyme
Location: 16430 - 17170 (-)
Type: CAZyme
Location: 16430 - 17170 (-)
Gene ID: Rep_1293_c_41_12
Type: CAZyme
Location: 17157 - 19361 (-)
Type: CAZyme
Location: 17157 - 19361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Ezakiella
Species
Ezakiella massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.