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Cluster: Rep_1293_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1293_c_8 Rep_1293_c_8_44 44143 44760 + GH23
STP Rep_1293_c_8 Rep_1293_c_8_45 44757 46286 + SBP_bac_5
TC Rep_1293_c_8 Rep_1293_c_8_46 46424 47749 + 3.D.6.1.2
TC Rep_1293_c_8 Rep_1293_c_8_47 47759 48835 + 3.D.6.1.2
TC Rep_1293_c_8 Rep_1293_c_8_48 48832 49410 + 3.D.6.1.2
TC Rep_1293_c_8 Rep_1293_c_8_49 49400 50014 + 3.D.6.1.2
TC Rep_1293_c_8 Rep_1293_c_8_50 50014 50586 + 3.D.6.1.2
TC Rep_1293_c_8 Rep_1293_c_8_51 50596 51492 + 3.D.6.1.2
Gene ID: Rep_1293_c_8_44
Type: CAZyme
Location: 44143 - 44760 (+)
Gene ID: Rep_1293_c_8_45
Type: STP
Location: 44757 - 46286 (+)
Gene ID: Rep_1293_c_8_46
Type: TC
Location: 46424 - 47749 (+)
Gene ID: Rep_1293_c_8_47
Type: TC
Location: 47759 - 48835 (+)
Gene ID: Rep_1293_c_8_48
Type: TC
Location: 48832 - 49410 (+)
Gene ID: Rep_1293_c_8_49
Type: TC
Location: 49400 - 50014 (+)
Gene ID: Rep_1293_c_8_50
Type: TC
Location: 50014 - 50586 (+)
Gene ID: Rep_1293_c_8_51
Type: TC
Location: 50596 - 51492 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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