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Cluster: Rep_1291_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1291_c_64 Rep_1291_c_64_69 80093 80812 + 9.B.27.1.2
pfam Rep_1291_c_64 Rep_1291_c_64_70 80778 81473 + VTT_dom
CAZyme Rep_1291_c_64 Rep_1291_c_64_71 81489 82175 + GT2
pfam Rep_1291_c_64 Rep_1291_c_64_72 82185 83156 + CCG
pfam Rep_1291_c_64 Rep_1291_c_64_73 83161 83592 + C_GCAxxG_C_C
TC Rep_1291_c_64 Rep_1291_c_64_74 83633 84910 + 3.A.1.19.4
pfam Rep_1291_c_64 Rep_1291_c_64_75 84886 85746 + BPD_transp_1
pfam Rep_1291_c_64 Rep_1291_c_64_76 85730 86515 + BPD_transp_1
TC Rep_1291_c_64 Rep_1291_c_64_77 86503 87423 + 3.A.1.11.8
Gene ID: Rep_1291_c_64_69
Type: TC
Location: 80093 - 80812 (+)
Gene ID: Rep_1291_c_64_70
Type: pfam
Location: 80778 - 81473 (+)
Gene ID: Rep_1291_c_64_71
Type: CAZyme
Location: 81489 - 82175 (+)
Gene ID: Rep_1291_c_64_72
Type: pfam
Location: 82185 - 83156 (+)
Gene ID: Rep_1291_c_64_73
Type: pfam
Location: 83161 - 83592 (+)
Gene ID: Rep_1291_c_64_74
Type: TC
Location: 83633 - 84910 (+)
Gene ID: Rep_1291_c_64_75
Type: pfam
Location: 84886 - 85746 (+)
Gene ID: Rep_1291_c_64_76
Type: pfam
Location: 85730 - 86515 (+)
Gene ID: Rep_1291_c_64_77
Type: TC
Location: 86503 - 87423 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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