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Cluster: Rep_1291_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1291_c_48 Rep_1291_c_48_116 123180 123845 + GH23
STP Rep_1291_c_48 Rep_1291_c_48_117 123835 125403 + SBP_bac_5
TC Rep_1291_c_48 Rep_1291_c_48_118 125651 126976 + 3.D.6.1.2
TC Rep_1291_c_48 Rep_1291_c_48_119 126987 128165 + 3.D.6.1.2
TC Rep_1291_c_48 Rep_1291_c_48_120 128165 128740 + 3.D.6.1.2
TC Rep_1291_c_48 Rep_1291_c_48_121 128730 129323 + 3.D.6.1.2
TC Rep_1291_c_48 Rep_1291_c_48_122 129326 129898 + 3.D.6.1.2
TC Rep_1291_c_48 Rep_1291_c_48_123 129909 130814 + 3.D.6.1.2
Gene ID: Rep_1291_c_48_116
Type: CAZyme
Location: 123180 - 123845 (+)
Gene ID: Rep_1291_c_48_117
Type: STP
Location: 123835 - 125403 (+)
Gene ID: Rep_1291_c_48_118
Type: TC
Location: 125651 - 126976 (+)
Gene ID: Rep_1291_c_48_119
Type: TC
Location: 126987 - 128165 (+)
Gene ID: Rep_1291_c_48_120
Type: TC
Location: 128165 - 128740 (+)
Gene ID: Rep_1291_c_48_121
Type: TC
Location: 128730 - 129323 (+)
Gene ID: Rep_1291_c_48_122
Type: TC
Location: 129326 - 129898 (+)
Gene ID: Rep_1291_c_48_123
Type: TC
Location: 129909 - 130814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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