Cluster: Rep_1289_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1289
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1289_c_8 | Rep_1289_c_8_1 | 3 | 1085 | - | 2.A.114.1.2 |
| CAZyme | Rep_1289_c_8 | Rep_1289_c_8_2 | 1275 | 2396 | - | GT28 |
| pfam | Rep_1289_c_8 | Rep_1289_c_8_3 | 2575 | 3681 | + | AI-2E_transport |
| TC | Rep_1289_c_8 | Rep_1289_c_8_4 | 3904 | 4107 | + | 2.A.5.5.5 |
| TC | Rep_1289_c_8 | Rep_1289_c_8_5 | 4195 | 4851 | + | 1.A.62.2.1 |
| TC | Rep_1289_c_8 | Rep_1289_c_8_6 | 5031 | 6593 | + | 2.A.35.1.1 |
Gene ID: Rep_1289_c_8_1
Type: TC
Location: 3 - 1085 (-)
Type: TC
Location: 3 - 1085 (-)
Gene ID: Rep_1289_c_8_2
Type: CAZyme
Location: 1275 - 2396 (-)
Type: CAZyme
Location: 1275 - 2396 (-)
Gene ID: Rep_1289_c_8_3
Type: pfam
Location: 2575 - 3681 (+)
Type: pfam
Location: 2575 - 3681 (+)
Gene ID: Rep_1289_c_8_4
Type: TC
Location: 3904 - 4107 (+)
Type: TC
Location: 3904 - 4107 (+)
Gene ID: Rep_1289_c_8_5
Type: TC
Location: 4195 - 4851 (+)
Type: TC
Location: 4195 - 4851 (+)
Gene ID: Rep_1289_c_8_6
Type: TC
Location: 5031 - 6593 (+)
Type: TC
Location: 5031 - 6593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Filifactoraceae
Genus
Criibacterium
Species
Criibacterium bergeronii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.