Cluster: Rep_1289_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1289
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1289_c_2 | Rep_1289_c_2_27 | 25170 | 26942 | + | GH3 |
| TC | Rep_1289_c_2 | Rep_1289_c_2_28 | 27101 | 28132 | - | 2.A.98.1.4 |
| TF | Rep_1289_c_2 | Rep_1289_c_2_29 | 28234 | 29166 | + | HTH_1 |
| pfam | Rep_1289_c_2 | Rep_1289_c_2_30 | 29172 | 29699 | - | ECF-ribofla_trS | ECF_trnsprt |
| TC | Rep_1289_c_2 | Rep_1289_c_2_31 | 29779 | 31971 | - | 1.B.52.2.1 |
Gene ID: Rep_1289_c_2_27
Type: CAZyme
Location: 25170 - 26942 (+)
Type: CAZyme
Location: 25170 - 26942 (+)
Gene ID: Rep_1289_c_2_28
Type: TC
Location: 27101 - 28132 (-)
Type: TC
Location: 27101 - 28132 (-)
Gene ID: Rep_1289_c_2_29
Type: TF
Location: 28234 - 29166 (+)
Type: TF
Location: 28234 - 29166 (+)
Gene ID: Rep_1289_c_2_30
Type: pfam
Location: 29172 - 29699 (-)
Type: pfam
Location: 29172 - 29699 (-)
Gene ID: Rep_1289_c_2_31
Type: TC
Location: 29779 - 31971 (-)
Type: TC
Location: 29779 - 31971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Filifactoraceae
Genus
Criibacterium
Species
Criibacterium bergeronii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.