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Cluster: Rep_1289_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1289_c_13 Rep_1289_c_13_30 23585 24655 - GT2
CAZyme Rep_1289_c_13 Rep_1289_c_13_31 24673 25734 - GT2
TC Rep_1289_c_13 Rep_1289_c_13_32 25779 26864 - 4.D.1.3.2
STP Rep_1289_c_13 Rep_1289_c_13_33 26910 27968 - TPR_1
CAZyme Rep_1289_c_13 Rep_1289_c_13_34 28019 29101 - GT2
pfam Rep_1289_c_13 Rep_1289_c_13_35 29271 30119 - Flagellin_N | Flagellin_C
pfam Rep_1289_c_13 Rep_1289_c_13_36 30547 33717 - Cu_amine_oxidN1
TC Rep_1289_c_13 Rep_1289_c_13_37 34708 35262 - 2.A.51.1.6
Gene ID: Rep_1289_c_13_30
Type: CAZyme
Location: 23585 - 24655 (-)
Gene ID: Rep_1289_c_13_31
Type: CAZyme
Location: 24673 - 25734 (-)
Gene ID: Rep_1289_c_13_32
Type: TC
Location: 25779 - 26864 (-)
Gene ID: Rep_1289_c_13_33
Type: STP
Location: 26910 - 27968 (-)
Gene ID: Rep_1289_c_13_34
Type: CAZyme
Location: 28019 - 29101 (-)
Gene ID: Rep_1289_c_13_35
Type: pfam
Location: 29271 - 30119 (-)
Gene ID: Rep_1289_c_13_36
Type: pfam
Location: 30547 - 33717 (-)
Gene ID: Rep_1289_c_13_37
Type: TC
Location: 34708 - 35262 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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