Cluster: Rep_1289_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: Rep_1289
- CGC Family ID: CGCFAM_00010
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1289_c_0 | Rep_1289_c_0_81 | 86324 | 86695 | - | 1.A.43.1.13 |
| CAZyme | Rep_1289_c_0 | Rep_1289_c_0_82 | 87137 | 88672 | - | GH77 |
| TF | Rep_1289_c_0 | Rep_1289_c_0_83 | 88639 | 89670 | - | LacI |
| TC | Rep_1289_c_0 | Rep_1289_c_0_84 | 89674 | 90510 | - | 3.A.1.1.45 |
| TC | Rep_1289_c_0 | Rep_1289_c_0_85 | 90510 | 91355 | - | 3.A.1.1.45 |
| TC | Rep_1289_c_0 | Rep_1289_c_0_86 | 91537 | 92895 | - | 3.A.1.1.45 |
Gene ID: Rep_1289_c_0_81
Type: TC
Location: 86324 - 86695 (-)
Type: TC
Location: 86324 - 86695 (-)
Gene ID: Rep_1289_c_0_82
Type: CAZyme
Location: 87137 - 88672 (-)
Type: CAZyme
Location: 87137 - 88672 (-)
Gene ID: Rep_1289_c_0_83
Type: TF
Location: 88639 - 89670 (-)
Type: TF
Location: 88639 - 89670 (-)
Gene ID: Rep_1289_c_0_84
Type: TC
Location: 89674 - 90510 (-)
Type: TC
Location: 89674 - 90510 (-)
Gene ID: Rep_1289_c_0_85
Type: TC
Location: 90510 - 91355 (-)
Type: TC
Location: 90510 - 91355 (-)
Gene ID: Rep_1289_c_0_86
Type: TC
Location: 91537 - 92895 (-)
Type: TC
Location: 91537 - 92895 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Filifactoraceae
Genus
Criibacterium
Species
Criibacterium bergeronii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.