Cluster: Rep_1287_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1287
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1287_c_96 | Rep_1287_c_96_2 | 710 | 1846 | + | GT4 |
| pfam | Rep_1287_c_96 | Rep_1287_c_96_3 | 2106 | 2564 | + | GSHPx | AhpC-TSA |
| pfam | Rep_1287_c_96 | Rep_1287_c_96_4 | 2677 | 3636 | + | PBP_like_2 | PBP_like_2 |
| TC | Rep_1287_c_96 | Rep_1287_c_96_5 | 3754 | 4611 | + | 3.A.1.7.5 |
| TC | Rep_1287_c_96 | Rep_1287_c_96_6 | 4611 | 5429 | + | 3.A.1.7.5 |
| TC | Rep_1287_c_96 | Rep_1287_c_96_7 | 5430 | 6038 | + | 3.A.1.7.5 |
Gene ID: Rep_1287_c_96_2
Type: CAZyme
Location: 710 - 1846 (+)
Type: CAZyme
Location: 710 - 1846 (+)
Gene ID: Rep_1287_c_96_3
Type: pfam
Location: 2106 - 2564 (+)
Type: pfam
Location: 2106 - 2564 (+)
Gene ID: Rep_1287_c_96_4
Type: pfam
Location: 2677 - 3636 (+)
Type: pfam
Location: 2677 - 3636 (+)
Gene ID: Rep_1287_c_96_5
Type: TC
Location: 3754 - 4611 (+)
Type: TC
Location: 3754 - 4611 (+)
Gene ID: Rep_1287_c_96_6
Type: TC
Location: 4611 - 5429 (+)
Type: TC
Location: 4611 - 5429 (+)
Gene ID: Rep_1287_c_96_7
Type: TC
Location: 5430 - 6038 (+)
Type: TC
Location: 5430 - 6038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Aedoeadaptatus
Species
Aedoeadaptatus urinae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.