Cluster: Rep_1287_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1287
- CGC Family ID: CGCFAM_03922
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1287_c_90 | Rep_1287_c_90_2 | 411 | 1739 | + | 2.A.26.1.5 |
| TC | Rep_1287_c_90 | Rep_1287_c_90_3 | 2056 | 3417 | + | 2.A.22.5.3 |
| TC | Rep_1287_c_90 | Rep_1287_c_90_4 | 3783 | 5207 | + | 2.A.35.1.2 |
| CAZyme | Rep_1287_c_90 | Rep_1287_c_90_5 | 5211 | 5750 | + | GH73 |
Gene ID: Rep_1287_c_90_2
Type: TC
Location: 411 - 1739 (+)
Type: TC
Location: 411 - 1739 (+)
Gene ID: Rep_1287_c_90_3
Type: TC
Location: 2056 - 3417 (+)
Type: TC
Location: 2056 - 3417 (+)
Gene ID: Rep_1287_c_90_4
Type: TC
Location: 3783 - 5207 (+)
Type: TC
Location: 3783 - 5207 (+)
Gene ID: Rep_1287_c_90_5
Type: CAZyme
Location: 5211 - 5750 (+)
Type: CAZyme
Location: 5211 - 5750 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Aedoeadaptatus
Species
Aedoeadaptatus urinae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.