Cluster: Rep_1287_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1287
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1287_c_41 | Rep_1287_c_41_6 | 3747 | 4874 | + | GT4 |
| pfam | Rep_1287_c_41 | Rep_1287_c_41_7 | 4864 | 5346 | + | DUF4330 |
| NULL(UNKNOWN) | Rep_1287_c_41 | Rep_1287_c_41_8 | 5350 | 5910 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1287_c_41 | Rep_1287_c_41_9 | 5895 | 7265 | + | 9.B.67.1.1 |
| pfam | Rep_1287_c_41 | Rep_1287_c_41_10 | 7243 | 8343 | + | PS_pyruv_trans |
| CAZyme | Rep_1287_c_41 | Rep_1287_c_41_11 | 8318 | 9133 | + | GT26 |
Gene ID: Rep_1287_c_41_6
Type: CAZyme
Location: 3747 - 4874 (+)
Type: CAZyme
Location: 3747 - 4874 (+)
Gene ID: Rep_1287_c_41_7
Type: pfam
Location: 4864 - 5346 (+)
Type: pfam
Location: 4864 - 5346 (+)
Gene ID: Rep_1287_c_41_8
Type:
Location: 5350 - 5910 (+)
Type:
Location: 5350 - 5910 (+)
Gene ID: Rep_1287_c_41_9
Type: TC
Location: 5895 - 7265 (+)
Type: TC
Location: 5895 - 7265 (+)
Gene ID: Rep_1287_c_41_10
Type: pfam
Location: 7243 - 8343 (+)
Type: pfam
Location: 7243 - 8343 (+)
Gene ID: Rep_1287_c_41_11
Type: CAZyme
Location: 8318 - 9133 (+)
Type: CAZyme
Location: 8318 - 9133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Aedoeadaptatus
Species
Aedoeadaptatus urinae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.