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Cluster: Rep_1286_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1286_c_132 Rep_1286_c_132_14 13144 14367 - GT4
pfam Rep_1286_c_132 Rep_1286_c_132_15 14376 15164 - DnaJ
pfam Rep_1286_c_132 Rep_1286_c_132_16 15157 15522 - Zincin_1
TC Rep_1286_c_132 Rep_1286_c_132_17 15653 17266 - 2.A.35.2.1
TC Rep_1286_c_132 Rep_1286_c_132_18 17591 18385 - 2.A.5.5.5
TC Rep_1286_c_132 Rep_1286_c_132_19 18501 19013 - 3.A.1.26.10
Gene ID: Rep_1286_c_132_14
Type: CAZyme
Location: 13144 - 14367 (-)
Gene ID: Rep_1286_c_132_15
Type: pfam
Location: 14376 - 15164 (-)
Gene ID: Rep_1286_c_132_16
Type: pfam
Location: 15157 - 15522 (-)
Gene ID: Rep_1286_c_132_17
Type: TC
Location: 15653 - 17266 (-)
Gene ID: Rep_1286_c_132_18
Type: TC
Location: 17591 - 18385 (-)
Gene ID: Rep_1286_c_132_19
Type: TC
Location: 18501 - 19013 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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